BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B04LP1|AL427999
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1428 1623 0.0
3x_Contig1557 150 6e-36
3x_Contig1663 148 2e-35
3x_Contig1518 144 4e-34
3x_Contig1374 142 1e-33
3x_Contig1446 140 6e-33
3x_Contig1521 138 2e-32
3x_Contig1741 106 9e-23
3x_Contig1272 104 4e-22
>3x_Contig1428
Length = 9146
Score = 1623 bits (814), Expect = 0.0
Identities = 838/848 (98%), Gaps = 2/848 (0%)
Strand = Plus / Minus
Query: 1 atgtacaaatyaaccatgacaccggaatgggcctgtgacagcattctccgaacttatacg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6547 atgtacaaattaaccatgacaccggaatgggcctgtgacagcattctccgaacttatacg 6488
Query: 61 agttatgtgacttgctcagtatatcaattatyatccgatatagtgtaacgactatcacat 120
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 6487 agttatgtgacttgctcagtatatcaattattatccgatatagtgtaacggctatcacat 6428
Query: 121 cacgctttcaccgtggagaccggggttcgactccccgtatcggagtatctttttatttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6427 cacgctttcaccgtggagaccggggttcgactccccgtatcggagtatctttttatttga 6368
Query: 181 agcctatctacttagtagatgaacgaccgtgtgataaacttgtttcgaccggaaaraccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 6367 agcctatctacttagtagatgaacgaccgtgtgataaacttgtttcgaccggaaagaccg 6308
Query: 241 tctcctcaaattcacaaagctccaacccctacctgtgacaacagcataccaacgtaaaah 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6307 tctcctcaaattcacaaagctccaacccctacctgtgacaacagcataccaacgtaaaat 6248
Query: 301 gttttthtttttatttccttagtgctttaaagtccaattgactaacgattaatacacagt 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6247 gtttttttttttatttccttagtgctttaaagtccaattgactaacgattaatacacagt 6188
Query: 361 tataaaahtttggacgacatgacttatttaacattgccggatctggttagctcacatgag 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6187 tataaaattttggacgacatgacttatttaacattgccggatctggttagctcacatgag 6128
Query: 421 taagtggtgtttttacgccaacactaaggaatctaacctatgtacggctgttgatacttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6127 taagtggtgtttttacgccaacactaaggaatctaacctatgtacggctgttgatacttc 6068
Query: 481 cttctctgttccgtctaatagccatacctgtgttaaaatacactctttctcatgcgatac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6067 cttctctgttccgtctaatagccatacctgtgttaaaatacactctttctcatgcgatac 6008
Query: 541 aatattatyatttaagcgttgcaaagtggataaattgcggaaatgaaagcttgccattat 600
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6007 aatattattatttaagcgttgcaaagtggataaattgcggaaatgaaagcttgccattat 5948
Query: 601 gtgttggtacgatgaatgtgaaatgtagtgatgccatttcttgggatcatttcttggcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5947 gtgttggtacgatgaatgtgaaatgtagtgatgccatttcttgggatcatttcttggcaa 5888
Query: 661 tttcacagaaatagtgataaattcgaatccacttgagtcaatgtcaaatagttctgtgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5887 tttcacagaaatagtgataaattcgaatccacttgagtcaatgtcaaatagttctgtgac 5828
Query: 721 tagaaattgaaatttttgaatggttggattaaaaccaaggttccatttagttgttataca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5827 tagaaattgaaatttttgaatggttggattaaaaccaaggttccatttagttgttataca 5768
Query: 781 ctgtctctggtctgatatcttactggcttgg-aatttaaaaggg-aatgacacttgataa 838
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 5767 ctgtctctggtctgatatcttactggcttggaaatttaaaagggaaatgacacttgataa 5708
Query: 839 gttagacc 846
||||||||
Sbjct: 5707 gttagacc 5700
>3x_Contig1557
Length = 10562
Score = 150 bits (75), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 90 atyatccgatatagtgtaacgactatcacatcacgctttcaccgtggagaccggggttcg 149
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2538 attatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcg 2597
Query: 150 actccccgtatcggagtatcttttt 174
||||||||||||||||||| |||||
Sbjct: 2598 actccccgtatcggagtattttttt 2622
>3x_Contig1663
Length = 13533
Score = 148 bits (74), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 89 tatyatccgatatagtgtaacgactatcacatcacgctttcaccgtggagaccggggttc 148
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 852 tatcatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttc 911
Query: 149 gactccccgtatcggagtat 168
||||||||||||||||||||
Sbjct: 912 gactccccgtatcggagtat 931
>3x_Contig1518
Length = 11021
Score = 144 bits (72), Expect = 4e-34
Identities = 75/76 (98%)
Strand = Plus / Minus
Query: 93 atccgatatagtgtaacgactatcacatcacgctttcaccgtggagaccggggttcgact 152
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5818 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 5759
Query: 153 ccccgtatcggagtat 168
||||||||||||||||
Sbjct: 5758 ccccgtatcggagtat 5743
>3x_Contig1374
Length = 8985
Score = 142 bits (71), Expect = 1e-33
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 93 atccgatatagtgtaacgactatcacatcacgctttcaccgtggagaccggggttcgact 152
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 8891 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 8832
Query: 153 ccccgtatcggag-tatctttttattt 178
||||||||||||| | |||||||||||
Sbjct: 8831 ccccgtatcggagttttctttttattt 8805
>3x_Contig1446
Length = 10598
Score = 140 bits (70), Expect = 6e-33
Identities = 73/74 (98%)
Strand = Plus / Minus
Query: 93 atccgatatagtgtaacgactatcacatcacgctttcaccgtggagaccggggttcgact 152
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3305 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 3246
Query: 153 ccccgtatcggagt 166
||||||||||||||
Sbjct: 3245 ccccgtatcggagt 3232
>3x_Contig1521
Length = 8057
Score = 138 bits (69), Expect = 2e-32
Identities = 72/73 (98%)
Strand = Plus / Minus
Query: 94 tccgatatagtgtaacgactatcacatcacgctttcaccgtggagaccggggttcgactc 153
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4296 tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 4237
Query: 154 cccgtatcggagt 166
|||||||||||||
Sbjct: 4236 cccgtatcggagt 4224
>3x_Contig1741
Length = 21706
Score = 106 bits (53), Expect = 9e-23
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 93 atccgatatagtgtaacgactatcacatcacgctttcaccgtggagaccggggttcgact 152
|||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 9345 atccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgact 9286
Query: 153 ccccgtatcggag 165
||| |||||||||
Sbjct: 9285 cccggtatcggag 9273
>3x_Contig1272
Length = 8315
Score = 104 bits (52), Expect = 4e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 94 tccgatatagtgtaacgactatcacatcacgctttcaccgtggagaccggggttcgactc 153
||||||||||||||||| |||||||| |||||| |||||||||||||| |||||||||||
Sbjct: 5215 tccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgactc 5156
Query: 154 cccgtatcggag 165
|| |||||||||
Sbjct: 5155 ccggtatcggag 5144
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4987
Number of Sequences: 1807
Number of extensions: 4987
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 9
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)